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Did you have transaction logging enabled and working before you attempted to enable DB2? The errors you posted look more like they have something to do with the Domino transaction log. Possibly the directory you specified for the transaction logs to be kept is invalid, or there is a file permission problem in that location.
Check your notes.ini for:
TRANSLOG_Path=logdir
...and verify that the location specified exists and is writeable by the account that the Domino server runs as. If the path is not absolute, it's assumed to be relative to the Domino data directory.
If you want to manually disable DB2, you can comment out all of the lines in the server's notes.ini file that start with DB2 by putting a semicolon in front of them. Ex:
;DB2INIT=<something>
Feedback response number PMAO7QNN4C created by ~Dan Zeklulygon on 03/31/2009